In a medium bowl, combine flour and cheeses. In a deep, heavy saucepan, heat wine and garlic to a simmer over medium heat. Add the cheese/flour mixture in several batches, stirring constantly. Stir in nutmeg and pepper. Cook about 10 minutes, until fondue is thick and creamy.
Serve with cubes of baguette, grapes, apples, or your favorite vegetables.
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